We currently have Owlim SE running on a staging server and 3 additional dev servers that we've been using for several months for testing pipelines, etc. The 3 dev servers were cloned off the staging server. Friday morning, I found that all 4 instances of owlim se could not start the pipeline with the following error:

org.openrdf.query.UpdateExecutionException: org.openrdf.repository.RepositoryException: org.openrdf.sail.SailException: com.ontotext.ces.owlim.exceptions.CESPipelineException: Couldn't create tmp app context

We have not made any changes, certainly not to all 4 servers at once. Every thing has been running fine up until now. It's almost like something expired causing a permissions issue, but our OWLIM SE license is supposed to be good until 14 Feb 2015.

Below is excerpt from catalina.out Let me know and thanks,

John

Sep 01, 2014 2:17:20 AM org.openrdf.workbench.proxy.ServerValidator checkServerPrefixes WARNING: server URL null does not have a prefix file: http: https: Sep 01, 2014 2:17:20 AM org.openrdf.workbench.proxy.WorkbenchServlet service INFO: Servicing repository: subtext Sep 01, 2014 2:17:20 AM org.openrdf.workbench.proxy.WorkbenchServlet setCredentials INFO: RemoteRepositoryManager URL: http://127.0.0.1:8081/openrdf-sesame Sep 01, 2014 2:17:20 AM org.openrdf.workbench.proxy.WorkbenchServlet setCredentials INFO: Setting user 'null' and password 'null'. Sep 01, 2014 2:17:20 AM org.openrdf.workbench.util.QueryStorage checkAccess INFO: repository: http://127.0.0.1:8081/openrdf-sesame/repositories/subtext Sep 01, 2014 2:17:20 AM org.openrdf.workbench.proxy.ServerValidator checkServerPrefixes WARNING: server URL null does not have a prefix file: http: https: Sep 01, 2014 2:17:20 AM org.openrdf.workbench.proxy.WorkbenchServlet service INFO: Servicing repository: subtext Sep 01, 2014 2:17:20 AM org.openrdf.workbench.proxy.WorkbenchServlet setCredentials INFO: RemoteRepositoryManager URL: http://127.0.0.1:8081/openrdf-sesame Sep 01, 2014 2:17:20 AM org.openrdf.workbench.proxy.WorkbenchServlet setCredentials INFO: Setting user 'null' and password 'null'. Sep 01, 2014 2:17:25 AM org.openrdf.workbench.proxy.ServerValidator checkServerPrefixes WARNING: server URL null does not have a prefix file: http: https: Sep 01, 2014 2:17:25 AM org.openrdf.workbench.proxy.WorkbenchServlet service INFO: Servicing repository: subtext Sep 01, 2014 2:17:25 AM org.openrdf.workbench.proxy.WorkbenchServlet setCredentials INFO: RemoteRepositoryManager URL: http://127.0.0.1:8081/openrdf-sesame Sep 01, 2014 2:17:25 AM org.openrdf.workbench.proxy.WorkbenchServlet setCredentials INFO: Setting user 'null' and password 'null'. Sep 01, 2014 2:17:25 AM org.openrdf.workbench.util.CookieHandler addCookie INFO: name: query value: Start+Pipeline Sep 01, 2014 2:17:25 AM org.openrdf.workbench.util.CookieHandler addCookie

INFO: un-encoded value: Start Pipeline

Sep 01, 2014 2:17:25 AM org.openrdf.workbench.util.CookieHandler addCookie INFO: name: ref value: id Sep 01, 2014 2:17:25 AM org.openrdf.workbench.util.CookieHandler addCookie

INFO: un-encoded value: id

Sep 01, 2014 2:17:25 AM org.openrdf.workbench.util.CookieHandler addCookie INFO: name: limit value: 0 Sep 01, 2014 2:17:25 AM org.openrdf.workbench.util.CookieHandler addCookie

INFO: un-encoded value: 0

Sep 01, 2014 2:17:25 AM org.openrdf.workbench.util.CookieHandler addCookie INFO: name: queryLn value: SPARQL Sep 01, 2014 2:17:25 AM org.openrdf.workbench.util.CookieHandler addCookie

INFO: un-encoded value: SPARQL

Sep 01, 2014 2:17:25 AM org.openrdf.workbench.util.CookieHandler addCookie INFO: name: infer value: true Sep 01, 2014 2:17:25 AM org.openrdf.workbench.util.CookieHandler addCookie

INFO: un-encoded value: true

Sep 01, 2014 2:17:25 AM org.openrdf.workbench.util.QueryStorage performAccessQuery INFO: PREFIX :https://openrdf.org/workbench/ ASK { :userName ?user ; :shared ?shared . FILTER (?user = "" || ?user = "" || ?shared) } Sep 01, 2014 2:17:25 AM org.openrdf.workbench.proxy.ServerValidator checkServerPrefixes WARNING: server URL null does not have a prefix file: http: https: Sep 01, 2014 2:17:25 AM org.openrdf.workbench.proxy.WorkbenchServlet service INFO: Servicing repository: subtext Sep 01, 2014 2:17:25 AM org.openrdf.workbench.proxy.WorkbenchServlet setCredentials INFO: RemoteRepositoryManager URL: http://127.0.0.1:8081/openrdf-sesame Sep 01, 2014 2:17:25 AM org.openrdf.workbench.proxy.WorkbenchServlet setCredentials INFO: Setting user 'null' and password 'null'. Sep 01, 2014 2:17:25 AM org.openrdf.workbench.proxy.ServerValidator checkServerPrefixes WARNING: server URL null does not have a prefix file: http: https: Sep 01, 2014 2:17:25 AM org.openrdf.workbench.proxy.WorkbenchServlet service INFO: Servicing repository: subtext Sep 01, 2014 2:17:25 AM org.openrdf.workbench.proxy.WorkbenchServlet setCredentials INFO: RemoteRepositoryManager URL: http://127.0.0.1:8081/openrdf-sesame Sep 01, 2014 2:17:25 AM org.openrdf.workbench.proxy.WorkbenchServlet setCredentials INFO: Setting user 'null' and password 'null'. Sep 01, 2014 2:17:25 AM org.openrdf.workbench.proxy.ServerValidator checkServerPrefixes WARNING: server URL null does not have a prefix file: http: https: Sep 01, 2014 2:17:25 AM org.openrdf.workbench.proxy.WorkbenchServlet service INFO: Servicing repository: subtext Sep 01, 2014 2:17:25 AM org.openrdf.workbench.proxy.WorkbenchServlet setCredentials INFO: RemoteRepositoryManager URL: http://127.0.0.1:8081/openrdf-sesame Sep 01, 2014 2:17:25 AM org.openrdf.workbench.proxy.WorkbenchServlet setCredentials INFO: Setting user 'null' and password 'null'. Sep 01, 2014 2:17:25 AM org.openrdf.workbench.util.CookieHandler addCookie INFO: name: query value: Start+Pipeline Sep 01, 2014 2:17:25 AM org.openrdf.workbench.util.CookieHandler addCookie

INFO: un-encoded value: Start Pipeline

Sep 01, 2014 2:17:25 AM org.openrdf.workbench.util.CookieHandler addCookie INFO: name: ref value: id Sep 01, 2014 2:17:25 AM org.openrdf.workbench.util.CookieHandler addCookie

INFO: un-encoded value: id

Sep 01, 2014 2:17:32 AM org.openrdf.workbench.proxy.ServerValidator checkServerPrefixes WARNING: server URL null does not have a prefix file: http: https: Sep 01, 2014 2:17:32 AM org.openrdf.workbench.proxy.WorkbenchServlet service INFO: Servicing repository: subtext Sep 01, 2014 2:17:32 AM org.openrdf.workbench.proxy.WorkbenchServlet setCredentials INFO: RemoteRepositoryManager URL: http://127.0.0.1:8081/openrdf-sesame Sep 01, 2014 2:17:32 AM org.openrdf.workbench.proxy.WorkbenchServlet setCredentials INFO: Setting user 'null' and password 'null'. Sep 01, 2014 2:17:32 AM org.openrdf.workbench.proxy.ServerValidator checkServerPrefixes WARNING: server URL null does not have a prefix file: http: https: Sep 01, 2014 2:17:32 AM org.openrdf.workbench.proxy.WorkbenchServlet service INFO: Servicing repository: subtext Sep 01, 2014 2:17:32 AM org.openrdf.workbench.proxy.WorkbenchServlet setCredentials INFO: RemoteRepositoryManager URL: http://127.0.0.1:8081/openrdf-sesame Sep 01, 2014 2:17:32 AM org.openrdf.workbench.proxy.WorkbenchServlet setCredentials INFO: Setting user 'null' and password 'null'. Sep 01, 2014 2:17:32 AM org.openrdf.workbench.proxy.ServerValidator checkServerPrefixes WARNING: server URL null does not have a prefix file: http: https: Sep 01, 2014 2:17:32 AM org.openrdf.workbench.proxy.WorkbenchServlet service INFO: Servicing repository: subtext Sep 01, 2014 2:17:32 AM org.openrdf.workbench.proxy.WorkbenchServlet setCredentials INFO: RemoteRepositoryManager URL: http://127.0.0.1:8081/openrdf-sesame Sep 01, 2014 2:17:32 AM org.openrdf.workbench.proxy.WorkbenchServlet setCredentials INFO: Setting user 'null' and password 'null'. Sep 01, 2014 2:17:39 AM org.openrdf.workbench.proxy.ServerValidator checkServerPrefixes WARNING: server URL null does not have a prefix file: http: https: Sep 01, 2014 2:17:39 AM org.openrdf.workbench.proxy.WorkbenchServlet service INFO: Servicing repository: subtext Sep 01, 2014 2:17:39 AM org.openrdf.workbench.proxy.WorkbenchServlet setCredentials INFO: RemoteRepositoryManager URL: http://127.0.0.1:8081/openrdf-sesame Sep 01, 2014 2:17:39 AM org.openrdf.workbench.proxy.WorkbenchServlet setCredentials INFO: Setting user 'null' and password 'null'. Sep 01, 2014 2:17:40 AM org.openrdf.http.client.HTTPClient getErrorInfo WARNING: Server reports problem: org.openrdf.query.UpdateExecutionException: org.openrdf.repository.RepositoryException: org.openrdf.sail.SailException: com.ontotext.ces.owlim.exceptions.CESPipelineException: Couldn't create tmp app context Sep 01, 2014 2:17:40 AM org.openrdf.workbench.commands.UpdateServlet doPost WARNING: org.openrdf.workbench.exceptions.BadRequestException: org.openrdf.query.UpdateExecutionException: org.openrdf.repository.RepositoryException: org.openrdf.sail.SailException: com.ontotext.ces.owlim.exceptions.CESPipelineException: Couldn't create tmp app context org.openrdf.workbench.exceptions.BadRequestException: org.openrdf.query.UpdateExecutionException: org.openrdf.repository.RepositoryException: org.openrdf.sail.SailException: com.ontotext.ces.owlim.exceptions.CESPipelineException: Couldn't create tmp app context at org.openrdf.workbench.commands.UpdateServlet.executeUpdate(UpdateServlet.java:89) at org.openrdf.workbench.commands.UpdateServlet.doPost(UpdateServlet.java:56) at org.openrdf.workbench.base.TransformationServlet.service(TransformationServlet.java:106) at org.openrdf.workbench.base.BaseServlet.service(BaseServlet.java:136) at org.openrdf.workbench.proxy.ProxyRepositoryServlet.service(ProxyRepositoryServlet.java:104) at org.openrdf.workbench.proxy.WorkbenchServlet.service(WorkbenchServlet.java:222) at org.openrdf.workbench.proxy.WorkbenchServlet.handleRequest(WorkbenchServlet.java:151) at org.openrdf.workbench.proxy.WorkbenchServlet.service(WorkbenchServlet.java:119) at org.openrdf.workbench.proxy.WorkbenchGateway.service(WorkbenchGateway.java:131) at org.openrdf.workbench.base.BaseServlet.service(BaseServlet.java:136) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:305) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210) at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210) at org.openrdf.workbench.proxy.CookieCacheControlFilter.doFilter(CookieCacheControlFilter.java:63) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210) at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:222) at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:123) at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:502) at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:171) at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:100) at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:953) at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:118) at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:409) at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1044) at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:607) at org.apache.tomcat.util.net.JIoEndpoint$SocketProcessor.run(JIoEndpoint.java:313) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615) at java.lang.Thread.run(Thread.java:744)

Sep 01, 2014 2:17:40 AM org.openrdf.workbench.proxy.ServerValidator checkServerPrefixes WARNING: server URL null does not have a prefix file: http: https: Sep 01, 2014 2:17:40 AM org.openrdf.workbench.proxy.WorkbenchServlet service INFO: Servicing repository: subtext Sep 01, 2014 2:17:40 AM org.openrdf.workbench.proxy.WorkbenchServlet setCredentials INFO: RemoteRepositoryManager URL: http://127.0.0.1:8081/openrdf-sesame Sep 01, 2014 2:17:40 AM org.openrdf.workbench.proxy.WorkbenchServlet setCredentials INFO: Setting user 'null' and password 'null'. Sep 01, 2014 2:17:40 AM org.openrdf.workbench.proxy.ServerValidator checkServerPrefixes WARNING: server URL null does not have a prefix file: http: https: Sep 01, 2014 2:17:40 AM org.openrdf.workbench.proxy.WorkbenchServlet service INFO: Servicing repository: subtext Sep 01, 2014 2:17:40 AM org.openrdf.workbench.proxy.WorkbenchServlet setCredentials INFO: RemoteRepositoryManager URL: http://127.0.0.1:8081/openrdf-sesame Sep 01, 2014 2:17:40 AM org.openrdf.workbench.proxy.WorkbenchServlet setCredentials INFO: Setting user 'null' and password 'null'.

asked 01 Sep '14, 07:08

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Johno
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accept rate: 0%


Can you also provide us with anything relevant in the Aduna logs? (typically in <user-home>/.aduna/openrdf-sesame/logs)

link

answered 02 Sep '14, 11:43

itrend's gravatar image

itrend
1
accept rate: 0%

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Asked: 01 Sep '14, 07:08

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Last updated: 07 Jun, 00:59

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